# Copyright (c) 2014 Dave Love, University of Liverpool
# Copyright (c) 2018 Dave Love, University of Manchester
# MIT licence, per Fedora policy
%bcond_without openmpi
%bcond_without mpich
%bcond_with check
%if 0%{?fedora} >= 33
%bcond_without flexiblas
%endif
%if %{with flexiblas}
%global blaslib flexiblas
%else
%global blaslib openblas
%endif
%global somajor 2
%global soversion %{somajor}.1
# No sphinx in el8 as of 2019-09, and missing latex packages
%{!?el8:%global docs 1}
Name: hypre
Version: 2.18.2
Release: 2%{?dist}
Summary: High performance matrix preconditioners
License: LGPLv2
URL: http://www.llnl.gov/casc/hypre/
Source: https://github.com/hypre-space/hypre/archive/v%version/%{name}-%{version}.tar.gz
# Don't use hostname for tests and use two MPI processes
Patch2: hypre-test.patch
BuildRequires: gcc-c++ gcc-gfortran automake libtool libtool-ltdl-devel
BuildRequires: SuperLU-devel
BuildRequires: %{blaslib}-devel
%if 0%{?docs}
BuildRequires: doxygen-latex python-sphinx python-sphinx-theme-alabaster
BuildRequires: python%{?el7:3}-sphinx-latex /usr/bin/latexmk
BuildRequires: tex(threeparttable.sty) tex(hanging.sty) tex(adjustbox.sty)
BuildRequires: tex(fncychap.sty) tex(tabulary.sty) tex(capt-of.sty)
BuildRequires: tex(needspace.sty) tex(stackengine.sty) tex(listofitems.sty)
BuildRequires: tex(ulem.sty) tex(etoc.sty)
%endif
%global __requires_exclude libHYPRE.*
%{?filter_setup:
%filter_from_requires /libHYPRE/d
%filter_setup
}
%global desc \
Hypre is a set of matrix preconditioning libraries to aid in the\
solution of large systems of linear equations.
%description
%desc
%package devel
Summary: Development files for %name
Requires: %{?name}%{?_isa} = %{version}-%{release}
Requires: SuperLU-devel%{?_isa}
Requires: %{blaslib}-devel%{?_isa}
%description devel
Development files for %name
%if %{with openmpi}
%package openmpi
Summary: High performance matrix preconditioners - openmpi
Requires: openmpi%{?_isa}
BuildRequires: superlu_dist-openmpi-devel ptscotch-openmpi-devel
%description openmpi
%desc
This is the openmpi version.
%package openmpi-devel
Summary: Development files for %name-openmpi
Requires: %{name}-openmpi%{?_isa} = %{version}-%{release}
Requires: openmpi-devel%{?_isa} superlu_dist-openmpi-devel%{?_isa}
Requires: ptscotch-openmpi-devel%{?_isa}
Requires: %{blaslib}-devel%{?_isa}
%description openmpi-devel
Development files for %name-openmpi
%endif
%if %{with mpich}
%package mpich
Summary: High performance matrix preconditioners - mpich
Requires: mpich%{?_isa}
BuildRequires: superlu_dist-mpich-devel ptscotch-mpich-devel
BuildRequires: make
%description mpich
%desc
This is the mpich version.
%package mpich-devel
Summary: Development files for %name-mpich
Requires: %{name}-mpich%{?_isa} = %{version}-%{release}
%if 0%{?el7}
# https://bugzilla.redhat.com/show_bug.cgi?id=1397192
Requires: mpich-devel
%else
Requires: mpich-devel%{?_isa}
%endif
Requires: superlu_dist-mpich-devel%{?_isa} ptscotch-mpich-devel%{?_isa}
Requires: %{blaslib}-devel%{?_isa}
%description mpich-devel
Development files for %name-mpich
%endif
%if 0%{?docs}
%package doc
Summary: Documentation for hypre
BuildArch: noarch
%description doc
Documentation for hypre
%endif
%prep
%setup -q -n %name-%version
%patch2 -p1 -b .test
find \( -name \*.[ch] -o -name \*.cxx \) -perm /=x -exec chmod 0644 {} \;
%if %{with openmpi}
cp -a src openmpi
%endif
%if %{with mpich}
cp -a src mpich
%endif
%build
%global lalibs --with-blas-libs=%{blaslib} --with-lapack-libs=%{blaslib} \\\
--with-blas-lib-dirs=%_libdir --with-lapack-lib-dirs=%_libdir
pushd src
# -O3 seems like a good idea for vectorization, at least. We need LIBS to
# link the shared lib correctly.
export LIBS='-lsuperlu -fopenmp'
%configure --without-MPI --with-timing --with-openmp --enable-shared=yes \
%lalibs \
--with-superlu --with-superlu-include=%_includedir/SuperLU \
--with-superlu-libs=superlu --with-mli \
CFLAGS="$CFLAGS -O3"
%make_build SONAME=libHYPRE.so.%soversion
%{?docs:make -C docs # not smp-safe
rm docs/usr-manual-html/.buildinfo}
popd
# Specifying CC is necessary on f33 as MPI_LIB isn't being passed on
# for some reason; it was OK previously
%global do_mpi_build \
%configure --prefix=$MPI_HOME --with-MPI --with-MPI-include=$MPI_INCLUDE \\\
--with-MPI-lib-dirs=$MPI_LIB --with-timing --without-openmp \\\
%lalibs \\\
--enable-shared=yes --with-fei --with-mli \\\
--with-dsuperlu --with-dsuperlu-include=$MPI_INCLUDE/superlu_dist \\\
--with-dsuperlu-libs='superlu_dist ptscotch' \\\
CFLAGS="$CFLAGS -O3" CC=mpicc \
%make_build SONAME=libHYPRE.so.%soversion
export LIBS='-lsuperlu_dist -lptscotch'
%if %{with openmpi}
pushd openmpi
%_openmpi_load
%do_mpi_build
%_openmpi_unload
popd
%endif
%if %{with mpich}
pushd mpich
%_mpich_load
%do_mpi_build
%_mpich_unload
popd
%endif
%check
# Currently seeing inconsistent hangs on koji (as for superlu_dist).
# Assume it doesn't deadlock in realistic situations.
%if %{with check}
%if %{with openmpi}
export LD_LIBRARY_PATH=$(pwd)/openmpi/hypre/lib
export OMPI_MCA_orte_allocation_required=0
%_openmpi_load
pushd openmpi/test
%make_build SONAME=libHYPRE.so.%soversion
# A random selection to check, rather than all possibilities. (The
# relevant binaries aren't built for all the TEST_...s.)
./runtest.sh TEST_ij/*sh
popd
%endif
%endif
%install
make -C src install HYPRE_INSTALL_DIR=%{buildroot}%{_prefix} \
HYPRE_LIB_INSTALL=%{buildroot}%{_libdir} \
HYPRE_INC_INSTALL=%{buildroot}%{_includedir}/%{name} SONAME=libHYPRE.so.%soversion
%if %{with openmpi}
%_openmpi_load
make -C openmpi install HYPRE_INSTALL_DIR=%{buildroot}$MPI_HOME \
HYPRE_LIB_INSTALL=%{buildroot}$MPI_LIB \
HYPRE_INC_INSTALL=%{buildroot}$MPI_INCLUDE/%{name} SONAME=libHYPRE.so.%soversion
%_openmpi_unload
%endif
%if %{with mpich}
%_mpich_load
make -C mpich install HYPRE_INSTALL_DIR=%{buildroot}$MPI_HOME \
HYPRE_LIB_INSTALL=%{buildroot}$MPI_LIB \
HYPRE_INC_INSTALL=%{buildroot}$MPI_INCLUDE/%{name} SONAME=libHYPRE.so.%soversion
%_mpich_unload
%endif
for l in '' mpich/lib openmpi/lib %{?el7:openmpi3/lib}; do
ln -s libHYPRE.so.%soversion %{buildroot}%_libdir/$l/libHYPRE.so.%somajor
done
%ldconfig_scriptlets
%files
%doc CHANGELOG README.md
%license COPYRIGHT LICENSE-*
%{_libdir}/libHYPRE.so.%{somajor}*
%files devel
%{_libdir}/libHYPRE.so
%{_includedir}/%{name}
%if %{with openmpi}
%files openmpi
%doc CHANGELOG README.md
%license COPYRIGHT LICENSE-*
%{_libdir}/openmpi/lib/libHYPRE.so.%{somajor}*
%files openmpi-devel
%{_libdir}/openmpi/lib/libHYPRE.so
%{_includedir}/openmpi-%_arch/%{name}
%endif
%if %{with mpich}
%files mpich
%doc CHANGELOG README.md
%license COPYRIGHT LICENSE-*
%{_libdir}/mpich/lib/libHYPRE.so.%{somajor}*
%files mpich-devel
%{_libdir}/mpich/lib/libHYPRE.so
%{_includedir}/mpich-%_arch/%{name}
%endif
%if 0%{?docs}
%files doc
%doc CHANGELOG README.md src/examples
%license COPYRIGHT LICENSE-*
%doc src/docs/*.pdf src/docs/*-manual-html
%endif
%changelog
* Thu Aug 13 2020 Iñaki Úcar <iucar@fedoraproject.org> - 2.18.2-2
- https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager
* Fri Aug 7 2020 <vagrant@rawhide.localdomain> - 2.18.2-1
- Configure with CC=mpicc to fix FTBFS (#1863655)
- Update to 2.18.2
* Sat Aug 01 2020 Fedora Release Engineering <releng@fedoraproject.org> - 2.18.1-4
- Second attempt - Rebuilt for
https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Tue Jul 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 2.18.1-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Wed Jan 29 2020 Fedora Release Engineering <releng@fedoraproject.org> - 2.18.1-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Tue Oct 15 2019 Dave love <loveshack@fedoraproject.org> - 2.18.1-1
- New version
* Tue Oct 8 2019 Dave love <loveshack@fedoraproject.org> - 2.18.0-2
- Make libHYPRE.so.%%somajor links
* Tue Oct 1 2019 Dave love <loveshack@fedoraproject.org> - 2.18.0-1
- New version
- Add minor version to soname
* Wed Sep 18 2019 Dave love <loveshack@fedoraproject.org> - 2.17.0-2
- Don't try to build docs on el8
* Mon Sep 16 2019 Dave love <loveshack@fedoraproject.org> - 2.17.0-1
- New version, with soname bump and licence change
* Sat Sep 14 2019 Dave love <loveshack@fedoraproject.org> - 2.16.0-1
- New version from updated origin
- Build docs; add BRs
- Drop soname patch
* Wed Sep 11 2019 Orion Poplawski <orion@nwra.com> - 2.15.1-7
- Drop el6 conditionals, build openmpi for EL8
* Thu Jul 25 2019 Fedora Release Engineering <releng@fedoraproject.org> - 2.15.1-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
* Thu Feb 14 2019 Orion Poplawski <orion@nwra.com> - 2.15.1-5
- Rebuild for openmpi 3.1.3
* Fri Feb 01 2019 Fedora Release Engineering <releng@fedoraproject.org> - 2.15.1-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
* Mon Dec 3 2018 Dave Love <loveshack@fedoraproject.org> - 2.15.1-3
- Revert omitting builtin BLAS, which is namedspaced
* Mon Dec 3 2018 Dave Love <loveshack@fedoraproject.org> - 2.15.1-2
- Fix FTBFS with current superlu_dist [#1654932]
- Clean up configuration and avoid builtin BLAS
* Wed Nov 21 2018 Dave Love <loveshack@fedoraproject.org> - 2.15.1-1
- New version, removing hypre_PFMGSetupInterpOp_CC0, hypre_finalize,
hypre_init, which appear actually to be internal, so soname unchanged
- Avoid tests
* Thu Jul 19 2018 Sandro Mani <manisandro@gmail.com> - 2.14.0-4
- Rebuild (scotch)
* Fri Jul 13 2018 Fedora Release Engineering <releng@fedoraproject.org> - 2.14.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Apr 24 2018 Antonio Trande <sagitter@fedoraproject.org> - 2.14.0-2
- Build hypre-openmpi on s390x (#1571450)
* Fri Mar 23 2018 Dave Love <loveshack@fedoraproject.org> - 2.14.0-1
- Update to 2.14.0 (#1557645)
- Reinstate superlu and use superlu_dist
* Wed Mar 07 2018 Adam Williamson <awilliam@redhat.com> - 2.13.0-6
- Rebuild to fix GCC 8 mis-compilation
See https://da.gd/YJVwk ("GCC 8 ABI change on x86_64")
* Fri Feb 16 2018 Dave Love <loveshack@fedoraproject.org> - 2.13.0-5
- Fix openblas BR (#1545197)
* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 2.13.0-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
* Mon Nov 6 2017 Dave Love <loveshack@fedoraproject.org> - 2.13.0-3
- Disable tests on ix86 temporarily
* Sat Nov 4 2017 Dave Love <loveshack@fedoraproject.org> - 2.13.0-3
- Revert last change in favour of updated superlu_dist
* Fri Nov 3 2017 Dave Love <loveshack@fedoraproject.org> - 2.13.0-2
- Fix link failure against parmetis
* Mon Oct 30 2017 Dave Love <loveshack@fedoraproject.org> - 2.13.0-1
- New version
- Configure --with-mli for compatibility
- Configure with superlu
- Remove -Dhypre_dgesvd=dgesvd_ bodge
- Bump soname major version (due to added elements in structs)
* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 2.11.2-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 2.11.2-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Fri Jul 07 2017 Igor Gnatenko <ignatenko@redhat.com> - 2.11.2-2
- Rebuild due to bug in RPM (RHBZ #1468476)
* Thu May 4 2017 Dave Love <loveshack@fedoraproject.org> - 2.11.2-1
- New version
* Wed Mar 15 2017 Orion Poplawski <orion@cora.nwra.com> - 2.11.1-8
- Build with openblas on all available architectures
* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 2.11.1-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
* Thu Dec 1 2016 Dave Love <loveshack@fedoraproject.org> - 2.11.1-6
- Conditionalize mpich-devel%%{?_isa}
* Fri Oct 21 2016 Orion Poplawski <orion@cora.nwra.com> - 2.11.1-5
- Rebuild for openmpi 2.0
* Fri Jul 22 2016 Dave Love <loveshack@fedoraproject.org> - 2.11.1-4
- Ship manuals correctly
* Wed Jul 20 2016 Dave Love <loveshack@fedoraproject.org> - 2.11.1-3
- Avoid openmpi on s390
- Patch to not call hostname in test.sh and use two procs
* Mon Jul 11 2016 Dave Love <loveshack@fedoraproject.org> - 2.11.1-2
- Fix openblas conditionals
* Mon Jul 11 2016 Dave Love <loveshack@fedoraproject.org> - 2.11.1-1
- New version
- Update URL
- Drop previous patches -- make single library with new soversion
- Adjust configure/build
- Run tests
- Compile with -O3
* Fri Apr 1 2016 Dave Love <loveshack@fedoraproject.org> - 2.11.0-1
- New version
- Adjust hypre-shlibs-interlink.patch and %%lalibs
* Mon Dec 14 2015 Dave Love <loveshack@fedoraproject.org> - 2.10.1-2
- Fix use of %%license for -mpich package
* Tue Dec 1 2015 Dave Love <loveshack@fedoraproject.org> - 2.10.1-1
- New version
- Remove -Wl,-z,defs from configure to avoid link error (patch5)
- Fix use of atlas on non-x86
- Fix %%license conditional
* Sun Jul 5 2015 Dave Love <d.love@liverpool.ac.uk> - 2.9.1a-1
- New version, without babel stuff
- Modify patches
- Use %%license
* Fri Feb 20 2015 Dave Love <d.love@liverpool.ac.uk> - 2.8.0b-16
- Conditionalize out mpich on ppc64 el6
- Use -f with libtoolize (for f22)
- Fix some missing _isa in requires
- Drop unnecessary configure patch
- Run tests
- Small simplifications
* Wed Feb 4 2015 Dave Love <d.love@liverpool.ac.uk> - 2.8.0b-15
- Fix requires
* Mon Dec 29 2014 Dave Love <d.love@liverpool.ac.uk> - 2.8.0b-15
- Build without internal superlu
* Thu Dec 11 2014 Dave Love <d.love@liverpool.ac.uk> - 2.8.0b-14
- mpich version
* Fri Nov 28 2014 Dave Love <d.love@liverpool.ac.uk> - 2.8.0b-13
- Initial packaging, following Debian, including patches
High release number to avoid clash with old SuSE-based version