The files in this directory are bugfix replacements for files in
the EMBOSS-6.1.0 distribution. Just drop the replacement files in
the location shown and redo the 'make install.'
Fix 1. EMBOSS-6.1.0/ajax/ajfeat.c
EMBOSS-6.1.0/ajax/ajseqread.c
EMBOSS-6.1.0/ajax/ajseqwrite.c
EMBOSS-6.1.0/jemboss/org/emboss/jemboss/gui/Browser.java
EMBOSS-6.1.0/jemboss/org/emboss/jemboss/gui/BuildProgramMenu.java
EMBOSS-6.1.0/jemboss/org/emboss/jemboss/gui/form/BuildJembossForm.java
EMBOSS-6.1.0/jemboss/org/emboss/jemboss/gui/sequenceChooser/InputSequenceAttributes.java
EMBOSS-6.1.0/jemboss/org/emboss/jemboss/soap/GetVersion.java
EMBOSS-6.1.0/jemboss/org/emboss/jemboss/soap/ShowDB.java
EMBOSS-6.1.0/jemboss/utils/install-jemboss-server.sh
EMBOSS-6.1.0/jemboss/lib/client.jar
29 Jul 2009: Fix feature specification problems in Jemboss.
Use version number to point to documentation URLs
Remove standalone option from server script.
Correct FASTQ input searching for '@' to start next sequence
Standardize FASTQ sequence formats with other OpenBio projects
Correct issues in igstrict, genpept and refseqp formats
Fix 2. EMBOSS-6.1.0/ajax/ajmem.h
EMBOSS-6.1.0/ajax/ajstr.c
EMBOSS-6.1.0/ajax/ajstr.h
EMBOSS-6.1.0/nucleus/embaln.c
24-Aug-2009: Fix string extension so that pointers in lists remain valid.
This fixes a bug in processing SwissProt complex descriptions.
Fix definition of AJRESIZE0 macro.
Fix processing of first match in a profile alignment (prophet).