%{?python_enable_dependency_generator}

%global modname moss

# Don't fail here because upstream says

# Note that some of the statistical tests depend on randomly generated data

# and fail from time to time because of this.

# ignatenkobrain: I got it failing from time to time in COPR

# Disable tests forever due to: https://github.com/mwaskom/moss/issues/17

%bcond_with check

Name:           python-%{modname}

Version:        0.5.0

Release:        11%{?dist}

Summary:        Assorted utilities for neuroimaging and cognitive science

# moss/external/mvpasurf.py is MIT

License:        BSD and MIT

URL:            https://github.com/mwaskom/moss

Source0:        https://github.com/mwaskom/moss/archive/v%{version}/%{modname}-%{version}.tar.gz

Patch0001:      0001-put-real-dependencies-into-metadata.patch

Patch0002:      0002-remove-use-of-deprecated-removed-scipy.stats.ss.patch

Patch0003:      0003-bunch-munch.patch

BuildArch:      noarch

%description

Moss is a library of functions, classes, and scripts to that may be useful for

analyzing scientific data. Because this package is developed for neuroimaging

and cognitive science, there is probably some bias towards applications that

are useful in that domain. However, the functions are intended to be written

in as general and lightweight a fashion as possible.

%package -n python3-%{modname}

Summary:        %{summary}

%{?python_provide:%python_provide python3-%{modname}}

Provides:       bundled(PyMVPA)

BuildRequires:  python3-devel

BuildRequires:  python3-setuptools

%if %{with check}

# install_requires

BuildRequires:  python3dist

BuildRequires:  matplotlib

BuildRequires:  python3dist

BuildRequires:  munch

BuildRequires:  python3dist

BuildRequires:  numpy

BuildRequires:  python3dist

BuildRequires:  nibabel

BuildRequires:  python3dist

BuildRequires:  pandas

BuildRequires:  python3dist

BuildRequires:  scikit-learn

BuildRequires:  python3dist

BuildRequires:  scipy

BuildRequires:  python3dist

BuildRequires:  seaborn

BuildRequires:  python3dist

BuildRequires:  six

# tests_require

BuildRequires:  python3dist

BuildRequires:  nose

BuildRequires:  python3dist

BuildRequires:  pytest

%endif

%description -n python3-%{modname}

Moss is a library of functions, classes, and scripts to that may be useful for

analyzing scientific data. Because this package is developed for neuroimaging

and cognitive science, there is probably some bias towards applications that

are useful in that domain. However, the functions are intended to be written

in as general and lightweight a fashion as possible.

Python 3 version.

%prep

%autosetup -n %{modname}-%{version} -p1

rm -vf licenses/BUNCH_LICENSE moss/external/bunch.py

%build

%py3_build

%install

%py3_install

# Depends on 'freeview' utility

rm -vf %{buildroot}%{_bindir}/recon_qc

%if %{with check}

%check

PYTHONPATH=%{buildroot}%{python3_sitelib} py.test-%{python3_version} -v

%endif

%files -n python3-%{modname}

%license LICENSE licenses/*

%doc README.md

%{_bindir}/check_mni_reg

%{_bindir}/recon_status

%{_bindir}/recon_movie

%{_bindir}/recon_process_stats

%{_bindir}/ts_movie

%{_bindir}/warp_qc

%{python3_sitelib}/%{modname}*

%changelog

* Wed Jul 29 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.5.0-11

- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

* Tue May 26 2020 Miro Hrončok <mhroncok@redhat.com> - 0.5.0-10

- Rebuilt for Python 3.9

* Thu Jan 30 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.5.0-9

- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild

* Thu Oct 03 2019 Miro Hrončok <mhroncok@redhat.com> - 0.5.0-8

- Rebuilt for Python 3.8.0rc1 (#1748018)

* Mon Aug 19 2019 Miro Hrončok <mhroncok@redhat.com> - 0.5.0-7

- Rebuilt for Python 3.8

* Fri Jul 26 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.5.0-6

- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild

* Sat Feb 02 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.5.0-5

- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild

* Wed Oct 17 2018 Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 0.5.0-4

- Subpackage python2-moss has been removed

  See https://fedoraproject.org/wiki/Changes/Mass_Python_2_Package_Removal

* Sat Jul 14 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.5.0-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild

* Tue Jun 19 2018 Miro Hrončok <mhroncok@redhat.com> - 0.5.0-2

- Rebuilt for Python 3.7

* Sun Feb 11 2018 Igor Gnatenko <ignatenkobrain@fedoraproject.org> - 0.5.0-1

- Update to 0.5.0

* Fri Feb 09 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.3.4-12

- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild

* Thu Jan 25 2018 Iryna Shcherbina <ishcherb@redhat.com> - 0.3.4-11

- Update Python 2 dependency declarations to new packaging standards

  (See https://fedoraproject.org/wiki/FinalizingFedoraSwitchtoPython3)

* Thu Jul 27 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.3.4-10

- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild

* Sat Feb 11 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.3.4-9

- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild

* Mon Dec 19 2016 Miro Hrončok <mhroncok@redhat.com> - 0.3.4-8

- Rebuild for Python 3.6

* Mon Sep 26 2016 Dominik Mierzejewski <rpm@greysector.net> - 0.3.4-7

- rebuilt for matplotlib-2.0.0

* Tue Jul 19 2016 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.3.4-6

- https://fedoraproject.org/wiki/Changes/Automatic_Provides_for_Python_RPM_Packages

* Thu Jun 16 2016 Igor Gnatenko <ignatenko@redhat.com> - 0.3.4-5

- Python3 binaries should require only python3 (RHBZ #1342502)

* Thu Feb 04 2016 Fedora Release Engineering <releng@fedoraproject.org> - 0.3.4-4

- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild

* Sun Dec 06 2015 Igor Gnatenko <i.gnatenko.brain@gmail.com> - 0.3.4-3

- Fix according review

* Wed Nov 25 2015 Igor Gnatenko <i.gnatenko.brain@gmail.com> - 0.3.4-2

- Provide only one version of binaries (py3)

* Thu Nov 05 2015 Igor Gnatenko <i.gnatenko.brain@gmail.com> - 0.3.4-1

- Initial package