Name:           dcm2niix
Version:        1.0.20180622
Release:        2%{?dist}
Summary:        DICOM to NIfTI converter

License:        BSD
URL:            http://www.nitrc.org/plugins/mwiki/index.php/dcm2nii:MainPage
Source0:        https://github.com/rordenlab/%{name}/archive/v%{version}/%{name}-v%{version}.tar.gz

BuildRequires:  gcc-c++
BuildRequires:  cmake
BuildRequires:  nifticlib-devel
BuildRequires:  zlib-devel
BuildRequires:  turbojpeg-devel
BuildRequires:  git
BuildRequires:  yaml-cpp-devel
BuildRequires:  CharLS-devel
BuildRequires:  openjpeg2-devel
BuildRequires:  python3-sphinx

Provides:       %{name}%{?_isa} = %{version}-%{release}

# console/ujpeg.{h,cpp}
# https://github.com/neurolabusc/dcm2niix/issues/8
Provides:       bundled(nanojpeg)

%description
dcm2niix is a tool designed to convert neuroimaging data from the NIfTI format
to the DICOM format.

%prep
%autosetup -n %{name}-%{version}
# Set executable name
sed -i 's/sphinx-build/sphinx-build-3/' docs/CMakeLists.txt

mkdir build/

%build
pushd build/
  %cmake -DUSE_STATIC_RUNTIME=OFF -DUSE_TURBOJPEG=ON -DUSE_OPENJPEG=ON  -DUSE_JPEGLS=ON -DZLIB_IMPLEMENTATION=System -DBATCH_VERSION=ON -DBUILD_DOCS=ON ../
  %make_build
popd

%install
pushd build/
  %make_install
popd

%files
%doc README.md VERSIONS.md
%license license.txt
%{_bindir}/%{name}
%{_bindir}/dcm2niibatch
%{_mandir}/man1/%{name}.1*
%{_mandir}/man1/dcm2niibatch.1*


%changelog
* Fri Nov 09 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 1.0.20180622-2
- Remove unneeded patch from spec

* Fri Nov 09 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 1.0.20180622-1
- Update to latest upstream release
- Enable multiple file formats
- Generate docs
- Generate batch binary

* Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.0-0.7.gitebc72ae
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild

* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.0-0.6.gitebc72ae
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild

* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.0-0.5.gitebc72ae
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild

* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.0-0.4.gitebc72ae
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild

* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.0-0.3.gitebc72ae
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild

* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.0-0.2.gitebc72ae
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild

* Sat Dec 05 2015 Igor Gnatenko <i.gnatenko.brain@gmail.com> - 0.0.0-0.1.gitebc72ae
- Initial package