The files in this directory are bugfix replacements for files in the EMBOSS-6.1.0 distribution. Just drop the replacement files in the location shown and redo the 'make install.' Fix 1. EMBOSS-6.1.0/ajax/ajfeat.c EMBOSS-6.1.0/ajax/ajseqread.c EMBOSS-6.1.0/ajax/ajseqwrite.c EMBOSS-6.1.0/jemboss/org/emboss/jemboss/gui/Browser.java EMBOSS-6.1.0/jemboss/org/emboss/jemboss/gui/BuildProgramMenu.java EMBOSS-6.1.0/jemboss/org/emboss/jemboss/gui/form/BuildJembossForm.java EMBOSS-6.1.0/jemboss/org/emboss/jemboss/gui/sequenceChooser/InputSequenceAttributes.java EMBOSS-6.1.0/jemboss/org/emboss/jemboss/soap/GetVersion.java EMBOSS-6.1.0/jemboss/org/emboss/jemboss/soap/ShowDB.java EMBOSS-6.1.0/jemboss/utils/install-jemboss-server.sh EMBOSS-6.1.0/jemboss/lib/client.jar 29 Jul 2009: Fix feature specification problems in Jemboss. Use version number to point to documentation URLs Remove standalone option from server script. Correct FASTQ input searching for '@' to start next sequence Standardize FASTQ sequence formats with other OpenBio projects Correct issues in igstrict, genpept and refseqp formats Fix 2. EMBOSS-6.1.0/ajax/ajmem.h EMBOSS-6.1.0/ajax/ajstr.c EMBOSS-6.1.0/ajax/ajstr.h EMBOSS-6.1.0/nucleus/embaln.c 24-Aug-2009: Fix string extension so that pointers in lists remain valid. This fixes a bug in processing SwissProt complex descriptions. Fix definition of AJRESIZE0 macro. Fix processing of first match in a profile alignment (prophet).