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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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# TODO:
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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# fix jemboss and enable it
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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%define emhome %{_datadir}/EMBOSS
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
Name: EMBOSS
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
Version: 6.1.0
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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Release: 6%{?dist}
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
Summary: The European Molecular Biology Open Software Suite
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
Group: Applications/Engineering
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
License: GPLv2+
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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URL: http://emboss.sf.net/
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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Source0: ftp://emboss.open-bio.org/pub/EMBOSS/%{name}-%{version}.tar.gz
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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Source1: README.fixes
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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Source2: jemboss.desktop
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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#Upstream patch
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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Patch0: ftp://emboss.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-3.gz
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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#Use system-wide pcre. Sent upstream.
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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Patch1: %{name}-system-pcre.patch
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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#Fedora-specific. Not sent upstream.
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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Patch2: %{name}-fedora.patch
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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#Remove extra destdir. Sent upstream.
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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Patch3: %{name}-6.1.0-destdir.patch
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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#Patch ensuring jemboss rebuild backported from CVS
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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Patch4: %{name}-6.1.0-rebuild.patch
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
BuildRequires: ant
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
BuildRequires: desktop-file-utils
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
BuildRequires: gd-devel
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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BuildRequires: java-devel >= 1:1.6.0
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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BuildRequires: jpackage-utils
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
BuildRequires: pam-devel
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
BuildRequires: pcre-devel
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
BuildRequires: axis jaf javamail jakarta-commons-discovery jakarta-commons-logging
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
BuildRequires: log4j regexp servlet xerces-j2 wsdl4j
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%description
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
EMBOSS is a new, free Open Source software analysis package specially
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
developed for the needs of the molecular biology (e.g. EMBnet) user community.
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
The software automatically copes with data in a variety of formats and even
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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allows transparent retrieval of sequence data from the web. Also, as extensive
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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libraries are provided with the package, it is a platform to allow other
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
scientists to develop and release software in true open source spirit.
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
EMBOSS also integrates a range of currently available packages and tools for
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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sequence analysis into a seamless whole.
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
Reference for EMBOSS: Rice,P. Longden,I. and Bleasby,A.
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
"EMBOSS: The European Molecular Biology Open Software Suite"
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
Trends in Genetics June 2000, vol 16, No 6. pp.276-277
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%package devel
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
Summary: Development tools for programs which will use the %{name} library
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
Group: Development/Libraries
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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Requires: %{name}-libs = %{version}-%{release}
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%description devel
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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The %{name}-devel package includes the header files and static libraries
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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necessary for developing programs which will use the %{name} library.
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%package libs
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
Summary: Shared libraries for %{name}
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
Group: System Environment/Libraries
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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%description libs
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
The %{name}-libs package includes the dynamic libraries
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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necessary for %{name}.
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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#%package -n jemboss
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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#Summary: Java interface to %{name}
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#Group: Applications/Engineering
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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#Requires: %{name} = %{version}-%{release}
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#Requires: java >= 1:1.6.0
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#Requires: jpackage-utils
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#Requires: axis jaf javamail jakarta-commons-discovery jakarta-commons-logging
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#Requires: log4j regexp servlet xerces-j2 wsdl4j
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#%description -n jemboss
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#Jemboss is a Java interface to EMBOSS, developed at
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#the HGMP-RC and in close collaboration with the EMBOSS
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#development team. It is distributed as part of the EMBOSS
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#software.
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#Documentation on Jemboss can be found at:
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#http://www.hgmp.mrc.ac.uk/Software/EMBOSS/Jemboss/
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%prep
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%setup -q
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%patch0 -p1
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%patch1 -p1 -b .pcre
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%patch2 -p0 -b .fedora
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%patch3 -p0 -b .destdir
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
%patch4 -p0 -b .jemboss-rebuild
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#install the patch readme
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
install -pm 644 %{SOURCE1} README.fixes
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#these files were executable for some reason
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
chmod 644 emboss/prettyplot.c emboss/polydot.c emboss/supermatcher.c
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#use newer log4j version
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
sed -i "s@log4j-1.2.8@log4j-1.2.14@" \
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|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
jemboss/lib/axis/Makefile.am \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
jemboss/lib/axis/Makefile.in \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
jemboss/utils/makeFileManagerJNLP.sh \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
jemboss/utils/makeJNLP.sh
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#use system java libraries
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
rm jemboss/lib/{activation,client,jakarta-regexp-1.2,mail,xerces}.jar
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
build-jar-repository -s -p jemboss/lib activation regexp javamail xerces-j2
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
mv jemboss/lib/regexp.jar jemboss/lib/jakarta-regexp-1.2.jar
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
mv jemboss/lib/javamail.jar jemboss/lib/mail.jar
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
mv jemboss/lib/xerces-j2.jar jemboss/lib/xerces.jar
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
rm jemboss/lib/axis/*.jar
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
build-jar-repository -s -p jemboss/lib/axis axis/axis-ant axis/axis axis/jaxrpc axis/saaj commons-discovery commons-logging log4j-1.2.14 servlet wsdl4j
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
for i in axis axis-ant jaxrpc saaj;
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
do
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
mv jemboss/lib/axis/axis_$i.jar jemboss/lib/axis/$i.jar;
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
done
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%build
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%configure \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
--disable-static \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
--with-x \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
--with-auth \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
--with-thread \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
--includedir=%{_includedir}/EMBOSS \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%ifarch ppc64 sparc64 x86_64
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
--enable-64 \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%endif
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
--with-java=/usr/lib/jvm/java/include \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
--with-javaos=/usr/lib/jvm/java/include/linux \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%{__make} %{?_smp_mflags}
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%install
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
rm -rf $RPM_BUILD_ROOT
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%{__make} install DESTDIR=$RPM_BUILD_ROOT
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
install -m 755 -d $RPM_BUILD_ROOT/%{_sysconfdir}/profile.d
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
cat << __EOF__ >> $RPM_BUILD_ROOT/%{_sysconfdir}/profile.d/emboss.sh
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|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
export PLPLOT_LIB=%{emhome}
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
export EMBOSS_ACDROOT=%{emhome}/acd
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
export EMBOSS_DOCROOT=%{emhome}/doc
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
export EMBOSS_DATABASE_DIR=%{emhome}/data
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
export EMBOSS_DATA=%{emhome}/data
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
__EOF__
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
cat << __EOF__ >> $RPM_BUILD_ROOT/%{_sysconfdir}/profile.d/emboss.csh
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
setenv PLPLOT_LIB %{emhome}
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
setenv EMBOSS_ACDROOT %{emhome}/acd
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
setenv EMBOSS_DOCROOT %{emhome}/doc
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
setenv EMBOSS_DATABASE_DIR %{emhome}/data
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
setenv EMBOSS_DATA %{emhome}/data
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
__EOF__
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
rm $RPM_BUILD_ROOT%{_libdir}/*.la
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#this file has zero length, so kill it
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
rm $RPM_BUILD_ROOT%{_datadir}/EMBOSS/test/data/dna.aln
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#fix executable permissions
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
pushd $RPM_BUILD_ROOT%{_datadir}/EMBOSS/jemboss/utils
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
chmod +x install-jemboss-server.sh keys.sh makeFileManagerJNLP.sh makeJar.csh \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
makeJNLP.sh
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
popd
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
pushd $RPM_BUILD_ROOT%{_datadir}/EMBOSS/jemboss/api
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
chmod +x getClasses.pl makeDocs.csh
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
popd
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#rename conflicting binaries
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
mv $RPM_BUILD_ROOT%{_bindir}/chaos $RPM_BUILD_ROOT%{_bindir}/em_chaos
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#install the desktop file
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#desktop-file-install \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#--dir=${RPM_BUILD_ROOT}%{_datadir}/applications \
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#%{SOURCE2}
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%clean
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
rm -rf $RPM_BUILD_ROOT
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%post libs -p /sbin/ldconfig
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%postun libs -p /sbin/ldconfig
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|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%files
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%defattr(-,root,root,-)
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%doc AUTHORS ChangeLog COPYING FAQ INSTALL LICENSE NEWS README README.fixes THANKS
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%{_bindir}/*
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%exclude %{_bindir}/runJemboss.csh
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%exclude %{_bindir}/jembossctl
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|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%{_datadir}/EMBOSS
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%exclude %{_datadir}/EMBOSS/jemboss
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|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%config %{_sysconfdir}/profile.d/*
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%files devel
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%defattr(-,root,root,-)
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%{_libdir}/*.so
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%{_includedir}/EMBOSS
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%files libs
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%defattr(-,root,root,-)
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%{_libdir}/*.so.*
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#%files -n jemboss
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#%defattr(-,root,root,-)
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#%doc jemboss/README jemboss/resources jemboss/api
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#%{_bindir}/runJemboss.csh
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#%{_bindir}/jembossctl
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
#%{_datadir}/applications/jemboss.desktop
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
#%{_datadir}/EMBOSS/jemboss
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
%changelog
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
* Sun Dec 13 2009 Julian Sikorski <belegdol@fedoraproject.org> - 6.1.0-6
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
- Added the upstream 1-3 patch
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
- Fixed bogus Patch3 description
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
- Jemboss is still disabled, but some improvements have been made
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
- Backported patch enabling jemboss rebuild from CVS
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
- Added ant and jpackage-utils to BuildRequires
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
- Made java-devel dependency versioned
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
- Switched to build-jar-repository to fill the dependencies
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
- Replaced versioned log4j calls with latest version
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
- Renamed EMBOSS-java to jemboss
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
- Added a desktop entry for jemboss from Debian
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
8df943e |
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
* Sat Oct 17 2009 Julian Sikorski <belegdol@fedoraproject.org> - 6.1.0-5
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
- Added comments explaining the purpose of each patch
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
* Mon Oct 05 2009 Julian Sikorski <belegdol@fedoraproject.org> - 6.1.0-4
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
- Renamed conflicting binaries
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
- Disabled jemboss
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
* Tue Sep 29 2009 Julian Sikorski <belegdol@fedoraproject.org> - 6.1.0-3
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
- Re-enabled system pcre usage
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
- Initial attempt at using system-wide .jar files
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
* Tue Sep 22 2009 Julian Sikorski <belegdol@fedoraproject.org> - 6.1.0-2
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
- Added the upstream 1-2 patch
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
* Wed Jul 29 2009 Julian Sikorski <belegdol@fedoraproject.org> - 6.1.0-1
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
- Updated to 6.1.0
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
- Dropped pcre-devel from BuildRequires for the time being
|
|
![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
a406291 |
- Ditto --with-java and --with-javaos
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Patched jemboss/Makefile.am not to include DESTDIR in runJemboss.sh
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Install the header files in EMBOSS subdir
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Added the missing executable bits
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Fri Jun 12 2009 Julian Sikorski <belegdol@fedoraproject.org> - 6.0.1-3
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Updated the upstream patch to 1-12
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Added the patch readme to %%doc
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Thu Apr 16 2009 Julian Sikorski <belegdol@fedoraproject.org> - 6.0.1-2
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Own %%{_datadir}/EMBOSS
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Don't use %%{name} macro in %%files
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Updated the upstream patch to 1-7
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Use dist instead of dist_tag
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Adjusted whitespaces
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Added pcre-devel to BuildRequires
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Fixed spurious executable permissions
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Removed the empty dna.aln file
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Patched jemboss.properties to include the paths this package uses
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Made the -java package require the main one
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Mon Sep 29 2008 Dominik Mierzejewski <rpm@greysector.net> 6.0.1-1
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- updated to 6.0.1
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- applied upstream patch 1-1
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- patched to use system pcre
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Tue Jan 08 2008 Dominik Mierzejewski <rpm@greysector.net> 5.0.0-1
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Cleaned up BioRPMs' spec
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Updated to 5.0.0
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Thu Mar 17 2005 Bent Terp <Bent.Terp@biosci.ki.se>
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Upped to 2.10.0
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Fri Jul 16 2004 Bent Terp <Bent.Terp@biosci.ki.se>
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Had forgotten the emboss_database_dir env var
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Wed Feb 18 2004 Bent Terp <Bent.Terp@biosci.ki.se>
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Tried to make the building more dynamic. Added Requires and BuildRequires
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Thu Dec 04 2003 Luc Ducazu <luc@biolinux.org>
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Build for EMBOSS 2.8.0
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- subpackage jemboss
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Wed Jun 11 2003 Luc Ducazu <luc@biolinux.org>
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Build for EMBOSS 2.7.1
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Tue Jan 28 2003 Luc Ducazu <luc@biolinux.org>
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Build for EMBOSS 2.6.0
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Programs moved to /usr/local/bin
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Adopted many ideas from Guillaume Rousse <g.rousse@linux-mandrake.com>
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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* Wed Nov 27 2002 Luc Ducazu <luc@biolinux.org>
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![](https://seccdn.libravatar.org/avatar/f3dd8dcaa52cd40178b3f887fbde60e61bc14e60d947bd02a0c19f5b6384a9a9?s=16&d=retro) |
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- Initial build for EMBOSS 2.5.1
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