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206681a |
diff -up EMBOSS-6.3.1/ajax/acd/Makefile.am.system-expat EMBOSS-6.3.1/ajax/acd/Makefile.am
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206681a |
diff -up EMBOSS-6.3.1/ajax/acd/Makefile.in.system-expat EMBOSS-6.3.1/ajax/acd/Makefile.in
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diff -up EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am.system-expat EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am
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diff -up EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in.system-expat EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in
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diff -up EMBOSS-6.3.1/ajax/core/Makefile.am.system-expat EMBOSS-6.3.1/ajax/core/Makefile.am
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206681a |
diff -up EMBOSS-6.3.1/ajax/core/Makefile.in.system-expat EMBOSS-6.3.1/ajax/core/Makefile.in
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diff -up EMBOSS-6.3.1/ajax/graphics/Makefile.am.system-expat EMBOSS-6.3.1/ajax/graphics/Makefile.am
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206681a |
diff -up EMBOSS-6.3.1/ajax/graphics/Makefile.in.system-expat EMBOSS-6.3.1/ajax/graphics/Makefile.in
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diff -up EMBOSS-6.3.1/ajax/Makefile.am.system-expat EMBOSS-6.3.1/ajax/Makefile.am
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206681a |
diff -up EMBOSS-6.3.1/ajax/Makefile.in.system-expat EMBOSS-6.3.1/ajax/Makefile.in
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diff -up EMBOSS-6.3.1/configure.in.system-expat EMBOSS-6.3.1/configure.in
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--- EMBOSS-6.3.1/configure.in.system-expat 2010-08-02 17:11:31.000000000 -0400
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+++ EMBOSS-6.3.1/configure.in 2010-08-02 17:12:11.831269942 -0400
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@@ -425,6 +425,7 @@ AC_ARG_ENABLE(systemlibs,
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if test "${enable_systemlibs}" = "yes" ; then
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have_systemlibs=yes
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AC_CHECK_LIB(pcre, pcre_compile)
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+ AC_CHECK_LIB(expat, XML_ParserCreate)
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fi
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AM_CONDITIONAL(ESYSTEMLIBS, test "$have_systemlibs" = "yes")
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AC_SUBST(ESYSTEMLIBS)
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diff -up EMBOSS-6.3.1/configure.system-expat EMBOSS-6.3.1/configure
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206681a |
--- EMBOSS-6.3.1/configure.system-expat 2010-08-02 17:11:31.825142800 -0400
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206681a |
+++ EMBOSS-6.3.1/configure 2010-08-02 17:14:33.060269076 -0400
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@@ -15339,6 +15339,51 @@ _ACEOF
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fi
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206681a |
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+{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for XML_ParserCreate in -lexpat" >&5
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+$as_echo_n "checking for XML_ParserCreate in -lexpat... " >&6; }
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+if test "${ac_cv_lib_expat_XML_ParserCreate+set}" = set; then :
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+ $as_echo_n "(cached) " >&6
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+else
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+ ac_check_lib_save_LIBS=$LIBS
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+LIBS="-lexpat $LIBS"
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+cat confdefs.h - <<_ACEOF >conftest.$ac_ext
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+/* end confdefs.h. */
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+
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+/* Override any GCC internal prototype to avoid an error.
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+ Use char because int might match the return type of a GCC
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+ builtin and then its argument prototype would still apply. */
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+#ifdef __cplusplus
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+extern "C"
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+#endif
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+char XML_ParserCreate ();
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+int
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+main ()
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+{
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+return XML_ParserCreate ();
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+ ;
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+ return 0;
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+}
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+_ACEOF
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+if ac_fn_c_try_link "$LINENO"; then :
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+ ac_cv_lib_expat_XML_ParserCreate=yes
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+else
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+ ac_cv_lib_expat_XML_ParserCreate=no
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+fi
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+rm -f core conftest.err conftest.$ac_objext \
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+ conftest$ac_exeext conftest.$ac_ext
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+LIBS=$ac_check_lib_save_LIBS
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+fi
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+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_expat_XML_ParserCreate" >&5
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+$as_echo "$ac_cv_lib_expat_XML_ParserCreate" >&6; }
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+if test "x$ac_cv_lib_expat_XML_ParserCreate" = x""yes; then :
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+ cat >>confdefs.h <<_ACEOF
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+#define HAVE_LIBEXPAT 1
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+_ACEOF
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+
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+ LIBS="-lexpat $LIBS"
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+
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206681a |
+fi
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+
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206681a |
fi
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206681a |
if test "$have_systemlibs" = "yes"; then
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206681a |
ESYSTEMLIBS_TRUE=
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206681a |
diff -up EMBOSS-6.3.1/emboss/Makefile.am.system-expat EMBOSS-6.3.1/emboss/Makefile.am
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206681a |
diff -up EMBOSS-6.3.1/emboss/Makefile.in.system-expat EMBOSS-6.3.1/emboss/Makefile.in
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206681a |
diff -up EMBOSS-6.3.1/nucleus/Makefile.am.system-expat EMBOSS-6.3.1/nucleus/Makefile.am
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206681a |
diff -up EMBOSS-6.3.1/nucleus/Makefile.in.system-expat EMBOSS-6.3.1/nucleus/Makefile.in
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