Summary: Crystallographic Binary File and Image Library

Name: CBFlib

Version: 0.9.5.15

Release: 3%{?dist}

# library files (*.so*) are LGPLv2+, all else is GPLv2+

License: GPLv2+ and (GPLv2+ or LGPLv2+)

Group: System Environment/Libraries

URL: http://www.bernstein-plus-sons.com/software/CBF

Source0: http://downloads.sourceforge.net/cbflib/%{name}-%{version}.tar.gz

BuildRequires: gcc-gfortran

BuildRequires: hdf5-devel

BuildRequires: pcre-devel

%description

CBFlib (Crystallographic Binary File library) is a library of ANSI-C

functions providing a simple mechanism for accessing Crystallographic

Binary Files (CBF files) and Image-supporting CIF (imgCIF) files. The

CBFlib API is loosely based on the CIFPARSE API for mmCIF files. Like

CIFPARSE, CBFlib does not perform any semantic integrity checks;

rather it simply provides functions to create, read, modify and write

CBF binary data files and imgCIF ASCII data files.

%package devel

Summary: Header files and library for developing programs with cbf

Requires: %{name}%{?_isa} = %{version}-%{release}

Group: Development/Libraries

Requires: hdf5-devel

%description devel

This package contains libraries and header files needed for program

development using the crystallographic binary file and image library.

%prep

%setup -q -n %{name}-%{version}

# various cleanups

iconv -f iso8859-15 -t utf-8 doc/cif_img_1.5.3_8Jul07.dic > doc/cif_img_1.5.3_8Jul07.dic.conv && mv -f doc/cif_img_1.5.3_8Jul07.dic.conv doc/cif_img_1.5.3_8Jul07.dic 

rm doc/.symlinks

rm doc/.undosymlinks

chmod 644 examples/*.c

%build

# make %{?_smp_mflags}

cd src

gcc -fPIC -DCBF_DONT_USE_LONG_LONG -D_USE_XOPEN_EXTENDED %{optflags} -c *.c -I../include/

gcc -shared -Wl,-soname,libcbf.so.0 -o libcbf.so.0.0.0 *.o -lhdf5 -lz -lm

rm *.o

gfortran -fPIC -fno-range-check %{optflags} -c *.f90 -I../include/

gfortran -shared -Wl,-soname,libfcb.so.0 -o libfcb.so.0.0.0 *.o

cd ../examples

utilsublist="adscimg2cbf

cbf2adscimg

adscimg2cbf"

for i in $utilsublist; do

  gcc %{optflags} ${i}.c ${i}_sub.c -I../include ../src/libcbf.so.0.0.0 -o ${i} -lm

done

# convert_image (taken out due to mktemp call)

utillist="convert_minicbf

makecbf

img2cif

cif2cbf

cif2c"

for i in $utillist; do

  gcc %{optflags} ${i}.c -I../include ../src/libcbf.so.0.0.0 -o ${i} -lm

done

%install

rm -rf %{buildroot}

# make install DESTDIR=%{buildroot} INSTALL='install -p'

mkdir -p %{buildroot}%{_libdir}

install -p -m 644 src/*.so* %{buildroot}%{_libdir}/

pushd %{buildroot}%{_libdir}

chmod +x libcbf.so.0.0.0

ln -sf libcbf.so.0.0.0 libcbf.so.0

ln -sf libcbf.so.0.0.0 libcbf.so

chmod +x libfcb.so.0.0.0

ln -sf libfcb.so.0.0.0 libfcb.so.0

ln -sf libfcb.so.0.0.0 libfcb.so

popd

mkdir -p %{buildroot}%{_bindir}

utilsublist="adscimg2cbf

cbf2adscimg

adscimg2cbf"

for i in $utilsublist; do

  install -p -m 755 examples/${i} %{buildroot}%{_bindir}/

done

# convert_image (taken out due to mktemp call)

utillist="convert_minicbf

makecbf

img2cif

cif2cbf

cif2c"

for i in $utillist; do

  install -p -m 755 examples/${i} %{buildroot}%{_bindir}/

done

mkdir -p %{buildroot}%{_includedir}/cbf

install -p -m 644 include/* %{buildroot}%{_includedir}/cbf/

%post -p /sbin/ldconfig

%postun -p /sbin/ldconfig

%clean

rm -rf %{buildroot}

%files

%license doc/gpl.txt

%doc README

# GPLv2+

%{_bindir}/adscimg2cbf

%{_bindir}/cbf2adscimg

# %{_bindir}/convert_image

%{_bindir}/convert_minicbf

%{_bindir}/makecbf

%{_bindir}/img2cif

%{_bindir}/cif2cbf

%{_bindir}/cif2c

# LGPLv2+

%{_libdir}/libcbf.so.0.0.0

%{_libdir}/libcbf.so.0

%{_libdir}/libfcb.so.0.0.0

%{_libdir}/libfcb.so.0

%files devel

# GPLv2+

%doc doc

# LGPLv2+

%{_libdir}/libcbf.so

%{_libdir}/libfcb.so

# GPLv2+

%{_includedir}/cbf

%changelog

* Sun Feb 05 2017 Kalev Lember <klember@redhat.com> - 0.9.5.15-3

- Rebuilt for libgfortran soname bump

* Tue Dec 06 2016 Orion Poplawski <orion@cora.nwra.com> - 0.9.5.15-2

- Rebuild for hdf5 1.8.18

* Wed Jun 29 2016 Orion Poplawski <orion@cora.nwra.com> - 0.9.5.15-1

- Update to 0.9.5.15

* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 0.9.5.14-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild

* Thu Jan 21 2016 Orion Poplawski <orion@cora.nwra.com> - 0.9.5.14-2

- Rebuild for hdf5 1.8.16

* Mon Dec 28 2015 Tim Fenn <tim.fenn@gmail.com> - 0.9.5.14-1

- update to 0.9.5.14

* Mon Jun 29 2015 Tim Fenn <tim.fenn@gmail.com> - 0.9.5.4-1

- update to 0.9.5.4

* Mon Jun 22 2015 Ralf Cors├ępius <corsepiu@fedoraproject.org> - 0.9.5.2-4

- Let *-devel Requires: hd5-devel (RHBZ #1233633).

* Tue Jun 16 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.9.5.2-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild

* Sun May 17 2015 Orion Poplawski <orion@cora.nwra.com> - 0.9.5.2-2

- Rebuild for hdf5 1.8.15

* Sun Mar 01 2015 Tim Fenn <tim.fenn@gmail.com> - 0.9.5.2-1

- update to 0.9.5.2

* Wed Jan 07 2015 Orion Poplawski <orion@cora.nwra.com> - 0.9.5.1-2

- Rebuild for hdf5 1.8.4

* Sun Sep 28 2014 Tim Fenn <tim.fenn@gmail.com> - 0.9.5.1-1

- update to 0.9.5.1

- remove convert_image due to mktemp call

* Fri Aug 15 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.9.2.3-7

- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild

* Fri Jun 06 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.9.2.3-6

- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild

* Fri Aug 02 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.9.2.3-5

- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild

* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.9.2.3-4

- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild

* Wed Jul 18 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.9.2.3-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild

* Sun Jan 29 2012 Tim Fenn <tim.fenn@gmail.com> - 0.9.2.3-2

- update requires

- fix permissions of .c files in examples directory

* Fri Dec 30 2011 Tim Fenn <tim.fenn@gmail.com> - 0.9.2.3-1

- update to 0.9.2.3

- remove duplicate adscimg2cbf

- fix typo

- use optflags and buildroot instead of RPM_OPT_FLAGS and RPM_BUILD_ROOT

- keep gpl.txt in doc dir

* Fri Jul 01 2011 Tim Fenn <fenn@stanford.edu> - 0.9.2.2-1

- update to 0.9.2.2 (removes pycifrw dependency)

* Mon Nov 15 2010 Tim Fenn <fenn@stanford.edu> - 0.9.1-1

- update to 0.9.1rc2

- add lm to linker for utils

* Mon Mar 08 2010 Tim Fenn <fenn@stanford.edu> - 0.9.0-1

- update to 0.9.0

- include examples

* Wed Dec 09 2009 Tim Fenn <fenn@stanford.edu> - 0.8.1-2

- add a define to cflags

- fix up doc

- license update

* Wed Sep 16 2009 Tim Fenn <fenn@stanford.edu> - 0.8.1-1

- initial build