From 1f7f4cdec365db12965e923275ee8f8ad3e432d9 Mon Sep 17 00:00:00 2001 From: Gianluca Sforna Date: Nov 12 2016 10:04:53 +0000 Subject: drop upstreamed patches --- diff --git a/rdkit-2016.03-add_moldraw_headers.patch b/rdkit-2016.03-add_moldraw_headers.patch deleted file mode 100644 index 8f7f7be..0000000 --- a/rdkit-2016.03-add_moldraw_headers.patch +++ /dev/null @@ -1,31 +0,0 @@ -diff --git a/Code/GraphMol/MolDraw2D/CMakeLists.txt b/Code/GraphMol/MolDraw2D/CMakeLists.txt -index 40a158a..d9711f3 100644 ---- a/Code/GraphMol/MolDraw2D/CMakeLists.txt -+++ b/Code/GraphMol/MolDraw2D/CMakeLists.txt -@@ -8,6 +8,8 @@ rdkit_headers(MolDraw2D.h - MolDraw2DSVG.h - MolDraw2Dwx.h - MolDraw2DUtils.h -+ MolDraw2DDetails.h -+ DEST GraphMol/MolDraw2D - ) - - if(RDK_BUILD_QT_SUPPORT) -@@ -22,7 +24,7 @@ if(RDK_BUILD_QT_SUPPORT) - - set(QTDRAW2D_SRC MolDraw2DQt.cpp) - set(EXTRA_LOCAL_LIBS ${EXTRA_LOCAL_LIBS} ${Qt5Widgets_LIBRARIES} ${Qt5OpenGL_LIBRARIES} ) -- rdkit_headers(MolDraw2DQt.h) -+ rdkit_headers(MolDraw2DQt.h DEST GraphMol/MolDraw2D) - endif(RDK_BUILD_QT_SUPPORT) - - if(RDK_BUILD_CAIRO_SUPPORT) -@@ -31,7 +33,7 @@ if(RDK_BUILD_CAIRO_SUPPORT) - set(EXTRA_LOCAL_LIBS ${EXTRA_LOCAL_LIBS} ${CAIRO_LIBRARIES} ) - ADD_DEFINITIONS("-DRDK_CAIRO_BUILD") - set(CAIRODRAW2D_SRC MolDraw2DCairo.cpp) -- rdkit_headers(MolDraw2DCairo.h) -+ rdkit_headers(MolDraw2DCairo.h DEST GraphMol/MolDraw2D) - endif(RDK_BUILD_CAIRO_SUPPORT) - - rdkit_library(MolDraw2D MolDraw2D.cpp MolDraw2DSVG.cpp diff --git a/rdkit-verbose_failure.patch b/rdkit-verbose_failure.patch deleted file mode 100644 index 2a9eec6..0000000 --- a/rdkit-verbose_failure.patch +++ /dev/null @@ -1,69 +0,0 @@ -diff --git a/rdkit/TestRunner.py b/rdkit/TestRunner.py -index c5f34d1..910b5a3 100755 ---- a/rdkit/TestRunner.py -+++ b/rdkit/TestRunner.py -@@ -22,7 +22,7 @@ TEST_PASSED=0 - def RunTest(exeName,args,extras): - if exeName=="python": - exeName=RDConfig.pythonExe -- args = args.split(' ') -+ args = args.split(' ') - - startDir = os.getcwd() - if 'dir' in extras: -@@ -65,7 +65,7 @@ def RunScript(script,doLongTests,verbose): - tests = mod.tests - except AttributeError: - return [],0 -- -+ - longTests = [] - if doLongTests: - try: -@@ -101,11 +101,14 @@ def RunScript(script,doLongTests,verbose): - # return immediately - sys.stderr.write("Exitng from %s\n" % str([exeName]+list(args))) - return failed, len(tests) + i + 1 -- -+ - nTests = len(tests)+len(longTests) - del sys.modules[script] -+ if verbose and failed: -+ for exeName,args,extras in failed: -+ print("!!! TEST FAILURE: ",exeName,args,extras,file=sys.stderr) - return failed,nTests -- -+ - def ReportResults(script,failedTests,nTests,runTime,verbose,dest): - if not nTests: - dest.write('!-!-!-!-!-!-!-!-!-!-!\n') -@@ -122,7 +125,7 @@ def ReportResults(script,failedTests,nTests,runTime,verbose,dest): - dirName = os.path.abspath(dirName) - dest.write('\t\t(%s): %s %s\n'%(dirName,exeName,args)) - -- -+ - if __name__=='__main__': - import getopt - args,extras = getopt.getopt(sys.argv[1:],'lv') -@@ -133,7 +136,7 @@ if __name__=='__main__': - doLongTests=1 - elif arg == '-v': - verbose=0 -- -+ - pwd = os.getcwd() - totNumFailed=0 - totNumRun=0 -@@ -180,7 +183,7 @@ if __name__=='__main__': - else: - sys.stderr.write(' All %d tests (in %d modules) passed\n'%(totNumRun,len(extras))) - sys.exit(totNumFailed) -- -- -- -- -+ -+ -+ -+ diff --git a/rdkit.spec b/rdkit.spec index 098234b..b146696 100644 --- a/rdkit.spec +++ b/rdkit.spec @@ -80,8 +80,6 @@ Patch1: rdkit-2015.03-use_cairo_backend_on_tests.patch Patch2: rdkit-2014.09-do_not_install_sping.patch Patch4: rdkit-2014.09-fix_cmake_files_path.patch Patch7: rdkit-2015.03-dont_install_contrib.patch -Patch10: rdkit-verbose_failure.patch -Patch11: rdkit-2016.03-add_moldraw_headers.patch %description Chemical informatics and machine learning toolkit @@ -157,8 +155,6 @@ pushd python2 %patch2 -p1 %patch4 -p1 %patch7 -p1 -%patch10 -p1 -%patch11 -p1 rm -rf rdkit/sping @@ -339,6 +335,7 @@ popd * Fri Nov 11 2016 Gianluca Sforna - 2016.09.1-1 - new upstream release - fix ppc/ppc64 build +- drop upstreamed patches * Wed Nov 2 2016 Gianluca Sforna - 2016.03.5-1 - new upstream release